Rye Bagels by Roxana Jullapat

This delicious recipe for classic bagels made with a rye sponge can be found in Roxana Jullapat's terrific Mother Grains cookbook which is available in the Janie's Mill bookstore.
Yield: 6 bagels
Total Time: 20 hours
Ingredients
For the rye sponge:
- ½ cup (65 g) Janie's Mill Dark Rye flour
- 1⁄4 teaspoon fine sea salt
- 1⁄8 teaspoon instant yeast
- 1⁄3 cup cold water
For the dough:
- 2⁄3 cup lukewarm water
- 1 teaspoon instant yeast
- 2 cups (270 g) Janie's Mill High-Protein Bread flour, plus extra for dusting (Sifted Artisan flour also works great here)
- 3⁄4 cup (115 g) Janie's Mill Whole-Kernel Bread flour (or try an heirloom variety like Turkey Red)
- 3 tablespoons whole milk
- 1 tablespoon plus 1 ½ teaspoons granulated sugar
- 1 ½ teaspoons fine sea salt
- 1 teaspoon barley malt syrup
For the topping:
- 1 ½ teaspoons caraway seeds
- 1 ½ teaspoons nigella seeds
- 1 ½ teaspoons poppy seeds
- 1 tablespoon plus 1 ½ teaspoons sesame seeds
- 3 tablespoons onion flakes
- 1⁄4 cup barley malt syrup (for boiling)
Instructions
The day prior to baking:
- Combine the ingredients for the rye sponge by stirring together the rye flour, salt, yeast, and cold water in a small bowl. Cover tightly and ferment at room temperature for 4 hours.
- After four hours, bloom the remaining teaspoon of yeast in 2⁄3 cup lukewarm water. Stir and set aside for five minutes.
- In a stand mixer fitted with the hook attachment or a large bowl, combine the dissolved yeast, rye sponge, flours, milk, sugar, salt, and barley malt syrup. Mix on low speed for 2 minutes to combine, then increase the speed to medium and mix for 2 more minutes until the dough feels firm and bouncy. Add 1-2 more tablespoons of water if you have unincorporated bits of flour or your dough feels very dry and mix until smooth once more.
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- If kneading by hand: Use a wooden spoon to mix the flour and water mixture until a shaggy dough forms. Turn the dough out onto a counter and knead for 6-8 minutes until a cohesive, smooth dough forms.
- Form bagel dough into a ball, place in a lightly oiled bowl, and cover tightly. Let rest at room temperature for 20-30 minutes.
- Coat a parchment lined baking sheet with oil or nonstick spray. Divide the dough into six equal pieces and form each piece into a ball. Cover the balls with a damp kitchen towel and let rest for 10 minutes.
- Form the bagels by poking a hole in the middle of each ball to create a hollow center. Stretch the hole until it measures 1-2 in. in diameter. Transfer the shaped bagels to the prepared sheet, cover with plastic wrap, and refrigerate overnight.
The next day:
- Remove the bagels from the refrigerator and let the sit, uncovered, at room temperature for 1 hour.
- Place an oven rack in the middle position and preheat the oven to 400°F. Coat a baking sheet with nonstick spray.
- Mix the everything topping ingredients and set aside. Prep any other toppings you may want to use.
- Bring a large saucepan or Dutch oven of water to a boil and stir in the barley malt syrup. Working in batches of 2 or 3 bagels at a time, poach the bagels for 30 seconds, flip with a slotted spoon, and poach for 30 more seconds on the second side. Use the slotted spoon to transfer the poached bagels to the prepared baking sheet. The bagels will have a prettier side - usually the side that went into the water first. Make sure this side is up. Sprinkle each bagel generously with topping, if desired.
- Transfer the baking sheet to the oven and bake for 15 minutes. Then rotate the baking sheet and bake for another 10-15 minutes until deep golden brown. Cool on a wire rack for 1 hour before serving.
Baker's Notes:
- If your dough feels dry or extremely stiff after the initial mixing, add 1-2 additional tablespoons of water. Whole-grain flour tends to absorb more water.
- Molasses can be used as an alternative to barley malt syrup, but barley malt syrup will give a more distinctive bagel flavor.
Posted on May 14 2025